Hello, thank you for your appreciation. i have two questions and I’m glad to assist.
I have three normal sample files and three patient sample files. These are 10X platform data consisting of barcodes, features, and matrix files.
I am trying to analyze them by integrating them. Here, I want to check a specific gene by dividing it into two groups, normal samples and patient samples. How can I split this?
I am a different person from the one in the first question. Unlike the samples in question 1, my data is composed of scRNA data from multiple samples. The sample groups are: tumor core, tumor border, and adjacent non-tumor region. It is available on (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi.)
However, instead of having barcodes, features, and matrix files configured for each sample, all samples are integrated into one set of barcodes, features, and matrix.
How can I divide the group into three groups, tumor core, tumor border, and adjacent non-tumor region, in this case?